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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
single cell RNA-seq
26
total RNA-seq
20
ATAC-seq
13
ChIP-seq
2
Hi-C
Assay category
59
Transcription
20
DNA accessibility
13
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
92
bam
70
bigWig
59
tsv
34
fastq
31
bed narrowPeak
2
bedpe bed3+
2
hic
Organism
94
Homo sapiens
Biosample type
45
tissue
33
primary cell
16
cell line
Organ
94
pancreas
49
epithelium
3
connective tissue
1
adipose tissue
Project
94
AMP
Genome assembly (visualization)
92
hg19
90
GRCh38
Lab
94
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
BIOSAMPLE
ASSAY
94 results
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Clear Filters
single cell RNA-seq
total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
25
19
1
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
pancreatic alpha cell
3
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cell line
EndoC_BH1
1
1
13
1
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