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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
ChIP-seq
98
single cell RNA-seq
25
total RNA-seq
10
ATAC-seq
Assay category
123
Transcription
103
DNA binding
10
DNA accessibility
Target of assay
75
histone
75
histone modification
44
broad histone mark
31
narrow histone mark
22
control
6
transcription factor
4
RNA binding protein
Date released
586
February, 2021
392
November, 2017
284
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
157
August, 2021
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
48
March, 2020
39
February, 2018
34
December, 2018
30
January, 2019
25
February, 2020
24
May, 2022
16
February, 2023
15
October, 2017
11
September, 2017
9
December, 2019
6
November, 2020
3
August, 2018
3
June, 2018
1
March, 2019
Available data
171
bed narrowPeak
128
bam
123
tsv
112
bigWig
64
bigBed narrowPeak
64
xls
57
txt
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
236
Homo sapiens
Biosample type
178
tissue
37
in vitro differentiated cells
17
cell line
4
primary cell
Organ
148
heart
23
kidney
13
liver
8
embryo
6
blood vessel
6
vasculature
4
epithelium
2
artery
1
pancreas
Project
236
AMP
Genome assembly (visualization)
105
GRCh38
104
hg19
Lab
226
AMP-T2D consortium
10
Bing Ren, UCSD
BIOSAMPLE
ASSAY
236 results
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Clear Filters
ChIP-seq
single cell RNA-seq
total RNA-seq
ATAC-seq
tissue
heart left ventricle
34
18
heart right ventricle
13
17
kidney
23
left cardiac atrium
18
right cardiac atrium
18
+ See 11 more…
in vitro differentiated cells
neural progenitor cell
20
7
10
cell line
HepG2
9
H1-hESC
8
primary cell
hepatocyte
4
See all biosamples
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