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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
232
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
232
DNA binding
27
Transcription
14
DNA accessibility
Target of assay
184
histone
184
histone modification
112
broad histone mark
72
narrow histone mark
37
control
11
transcription factor
9
RNA binding protein
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
271
bam
234
bigWig
208
bed narrowPeak
175
bigBed narrowPeak
73
fastq
26
tsv
1
csv
Organism
273
Homo sapiens
Biosample type
195
tissue
78
primary cell
Organ
78
heart
74
pancreas
66
epithelium
50
blood vessel
50
vasculature
28
brain
28
kidney
7
limb
7
musculature of body
5
artery
Project
273
AMP
Genome assembly (visualization)
234
hg19
232
GRCh38
Lab
273
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
32
missing controlled_by
month_released!
December, 2019
BIOSAMPLE
ASSAY
273 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
heart left ventricle
35
kidney
23
ascending aorta
16
thoracic aorta
16
temporal lobe
15
+ See 10 more…
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 2 more…
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