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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
376
ChIP-seq
89
total RNA-seq
9
WGBS
6
RRBS
5
ATAC-seq
5
DNase-seq
1
FAIRE-seq
Assay category
376
DNA binding
Target of assay
259
histone modification
258
histone
146
broad histone mark
111
narrow histone mark
64
control
53
transcription factor
12
RNA binding protein
3
chromatin remodeller
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
260
bam
236
bigWig
197
bed narrowPeak
181
fastq
96
bigBed narrowPeak
85
tagAlign
39
bed broadPeak
33
bed bed3+
13
bigBed broadPeak
Organism
369
Homo sapiens
Biosample type
256
tissue
67
in vitro differentiated cells
53
primary cell
Organ
117
connective tissue
94
pancreas
57
heart
50
adipose tissue
48
liver
26
epithelium
23
kidney
22
musculature of body
Project
376
AMP
Genome assembly (visualization)
238
hg19
215
GRCh38
Lab
376
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
16
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
376 results
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Clear Filters
ChIP-seq
tissue
liver
48
islet of Langerhans
42
subcutaneous abdominal adipose tissue
36
heart left ventricle
35
kidney
23
+ See 6 more…
in vitro differentiated cells
adipocyte
67
primary cell
skeletal muscle myoblast
15
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
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