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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
4
DNase-seq
3
total RNA-seq
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
40
DNA binding
6
DNA accessibility
3
Transcription
1
3D chromatin structure
Target of assay
33
histone
33
histone modification
23
broad histone mark
10
narrow histone mark
7
control
Date released
66
February, 2021
50
May, 2019
47
October, 2019
35
February, 2023
12
July, 2019
7
June, 2019
6
August, 2021
6
November, 2017
4
March, 2020
3
February, 2020
0
April, 2019
Available data
46
bam
36
bigWig
34
bed narrowPeak
33
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
4
bed bed3+
3
tsv
1
hic
1
tar
Organism
50
Homo sapiens
Biosample type
29
tissue
21
primary cell
Organ
98
brain
72
limb
68
heart
53
kidney
50
blood vessel
50
vasculature
43
nerve
35
epithelium
28
artery
22
eye
21
vein
19
pancreas
8
liver
6
connective tissue
4
gonad
4
ovary
3
adipose tissue
2
musculature of body
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
50
AMP
Genome assembly (visualization)
37
hg19
33
GRCh38
Lab
50
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
50 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
FAIRE-seq
Hi-C
tissue
tibial artery
23
2
1
1
ascending aorta
1
coronary artery
1
primary cell
endothelial cell of umbilical vein
17
2
1
1
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