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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
79
ATAC-seq
13
total RNA-seq
2
snATAC-seq
1
single cell RNA-seq
Assay category
81
DNA accessibility
80
DNA binding
14
Transcription
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
14
control
6
transcription factor
4
RNA binding protein
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
128
bed narrowPeak
79
bam
65
bigWig
64
bigBed narrowPeak
5
bed bed3
4
tsv
4
txt
Organism
175
Homo sapiens
Biosample type
175
tissue
88
primary cell
16
in vitro differentiated cells
6
cell line
Organ
93
heart
35
artery
35
blood vessel
35
vasculature
31
eye
23
kidney
18
pancreas
14
epithelium
8
bone element
8
skeleton
1
adipose tissue
1
brain
1
connective tissue
Project
157
AMP
18
T1D
Genome assembly (visualization)
99
GRCh38
98
hg19
Lab
157
AMP-T2D consortium
18
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
175 results
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ChIP-seq
ATAC-seq
total RNA-seq
snATAC-seq
single cell RNA-seq
tissue
coronary artery
35
heart left ventricle
35
kidney
23
islet of Langerhans
11
5
2
retina
15
2
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