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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
ChIP-seq
12
ATAC-seq
2
Hi-C
Assay category
129
DNA binding
12
DNA accessibility
2
3D chromatin structure
Target of assay
72
histone
72
histone modification
47
broad histone mark
34
transcription factor
25
narrow histone mark
21
control
6
RNA binding protein
2
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
129
bam
109
bigWig
107
bed narrowPeak
100
bigBed narrowPeak
53
fastq
14
tagAlign
5
bed broadPeak
1
bedpe
1
hic
Organism
143
Homo sapiens
Biosample type
115
tissue
28
cell line
Organ
57
heart
27
blood
27
bodily fluid
23
kidney
16
brain
10
pancreas
8
spleen
1
adipose tissue
1
connective tissue
1
liver
Project
143
AMP
Genome assembly (visualization)
111
hg19
110
GRCh38
Lab
137
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent control
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
143 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
tissue
heart left ventricle
35
kidney
23
brain
15
heart right ventricle
13
heart
9
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cell line
GM12878
27
HepG2
1
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