Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
118
ChIP-seq
26
ATAC-seq
25
total RNA-seq
2
Hi-C
Assay category
118
DNA binding
26
DNA accessibility
25
Transcription
2
3D chromatin structure
Target of assay
77
histone
77
histone modification
47
broad histone mark
30
narrow histone mark
21
transcription factor
20
control
11
RNA binding protein
6
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
168
bam
123
bed narrowPeak
122
bigWig
85
bigBed narrowPeak
30
fastq
25
tsv
2
bedpe bed3+
2
hic
Organism
171
Homo sapiens
Biosample type
127
tissue
39
cell line
5
in vitro differentiated cells
Organ
57
heart
55
pancreas
23
kidney
18
blood
18
bodily fluid
16
epithelium
7
spleen
5
liver
1
adipose tissue
1
connective tissue
Project
171
AMP
Genome assembly (visualization)
150
hg19
147
GRCh38
Lab
171
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
BIOSAMPLE
ASSAY
171 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
+ See 2 more…
cell line
GM12878
18
EndoC_BH1
13
1
1
1
HepG2
5
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
See all biosamples
Download