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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
5
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
66
DNA binding
4
Transcription
2
DNA accessibility
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
control
6
transcription factor
5
nucleotide modification
4
RNA binding protein
Date released
712
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
307
August, 2021
275
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
105
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
71
bam
70
bigWig
67
bed narrowPeak
65
bigBed narrowPeak
4
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
77
Homo sapiens
Biosample type
68
tissue
6
primary cell
3
cell line
Organ
47
heart
19
kidney
6
connective tissue
5
pancreas
3
epithelium
Project
77
AMP
Genome assembly (visualization)
71
hg19
70
GRCh38
Lab
72
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
target.investigated_as!
control
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
DNase-seq
tissue
heart left ventricle
29
kidney
19
heart right ventricle
11
heart
7
islet of Langerhans
2
primary cell
osteoblast
4
1
1
cell line
EndoC_BH1
3
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