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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ChIP-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
76
DNA binding
4
Transcription
2
DNA accessibility
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
19
control
6
transcription factor
5
nucleotide modification
RNA binding protein
Date released
715
February, 2021
403
August, 2017
394
May, 2021
369
November, 2017
341
May, 2020
318
August, 2021
314
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
64
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
81
bam
67
bigWig
64
bed narrowPeak
62
bigBed narrowPeak
4
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
92
Homo sapiens
Biosample type
80
tissue
6
cell line
6
primary cell
Organ
54
heart
22
kidney
10
pancreas
6
connective tissue
6
epithelium
Project
92
AMP
Genome assembly (visualization)
68
hg19
67
GRCh38
Lab
82
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
92 results
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Clear Filters
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
DNase-seq
tissue
heart left ventricle
32
kidney
22
heart right ventricle
13
heart
9
islet of Langerhans
4
cell line
EndoC_BH1
6
primary cell
osteoblast
4
1
1
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