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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
ChIP-seq
26
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
86
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
70
histone
70
histone modification
43
broad histone mark
27
narrow histone mark
16
control
transcription factor
5
RNA binding protein
Date released
710
February, 2021
383
May, 2021
364
August, 2017
341
May, 2020
308
August, 2021
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
162
November, 2017
115
May, 2019
108
July, 2019
74
April, 2019
73
September, 2018
64
March, 2020
61
October, 2018
60
November, 2019
59
September, 2020
52
December, 2017
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
25
February, 2020
24
November, 2018
23
October, 2017
19
April, 2020
16
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
131
bam
96
bed narrowPeak
90
bigWig
59
bigBed narrowPeak
20
tsv
2
bedpe bed3+
2
hic
Organism
134
Homo sapiens
Biosample type
114
tissue
15
cell line
5
in vitro differentiated cells
Organ
54
pancreas
52
heart
22
kidney
15
epithelium
1
adipose tissue
1
connective tissue
Project
134
AMP
Genome assembly (visualization)
118
hg19
115
GRCh38
Lab
134
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
target.investigated_as!
transcription factor
month_released!
October, 2019
BIOSAMPLE
ASSAY
134 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
heart left ventricle
30
kidney
22
heart right ventricle
13
heart
9
+ See 1 more…
cell line
EndoC_BH1
12
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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