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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
12
WGBS
10
snATAC-seq
8
Hi-C
6
ATAC-seq
2
FAIRE-seq
Assay category
Transcription
27
DNA methylation
18
DNA accessibility
8
3D chromatin structure
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
49
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
23
bed bedMethyl
23
bigBed bedMethyl
20
bigWig
17
bam
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
52
Homo sapiens
Biosample type
40
tissue
13
primary cell
Organ
14
heart
10
lung
8
epithelium
7
brain
7
vasculature
6
blood vessel
6
musculature of body
5
kidney
5
limb
3
liver
2
connective tissue
2
pancreas
1
artery
1
eye
1
pericardium
Project
43
AMP
10
LungMap
Genome assembly (visualization)
26
hg19
14
GRCh38
Lab
43
AMP-T2D consortium
10
Xin Sun, UCSD
Audit category:
2
inconsistent ontology term
assay_slims!
Transcription
BIOSAMPLE
ASSAY
53 results
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Clear Filters
RRBS
WGBS
snATAC-seq
Hi-C
ATAC-seq
FAIRE-seq
tissue
lung
10
heart left ventricle
1
4
2
gastrocnemius medialis
4
aorta
2
heart right ventricle
2
+ See 14 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 8 more…
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