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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
194
ChIP-seq
10
snATAC-seq
9
single cell RNA-seq
2
total RNA-seq
Assay category
194
DNA binding
11
Transcription
10
DNA accessibility
Target of assay
122
histone
122
histone modification
77
broad histone mark
52
control
45
narrow histone mark
20
transcription factor
16
RNA binding protein
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
196
bam
144
bigWig
142
bed narrowPeak
142
bigBed narrowPeak
60
fastq
2
tsv
Organism
214
Homo sapiens
Biosample type
208
tissue
7
primary cell
Organ
55
pancreas
50
blood vessel
50
vasculature
28
brain
23
adipose tissue
23
connective tissue
21
heart
19
lung
7
epithelium
7
limb
7
musculature of body
5
artery
5
kidney
Project
196
AMP
19
LungMap
Genome assembly (visualization)
144
hg19
143
GRCh38
Lab
196
AMP-T2D consortium
19
Xin Sun, UCSD
Audit category:
3
inconsistent ontology term
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
215 results
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Clear Filters
ChIP-seq
snATAC-seq
single cell RNA-seq
total RNA-seq
tissue
body of pancreas
35
lung
10
9
ascending aorta
16
endocrine pancreas
16
thoracic aorta
16
+ See 11 more…
primary cell
kidney epithelial cell
5
pancreatic acinar cell
2
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