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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
10
snATAC-seq
6
total RNA-seq
3
Hi-C
1
MPRA
Assay category
58
Transcription
10
DNA accessibility
3
3D chromatin structure
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
49
bam
49
bigWig
49
tsv
44
fastq
3
bedpe bed3+
3
cool
3
hic
1
txt
Organism
70
Homo sapiens
Biosample type
46
primary cell
25
tissue
1
cell line
Organ
42
pancreas
36
epithelium
19
lung
2
connective tissue
Project
50
AMP
19
LungMap
3
HPAP
Genome assembly (visualization)
52
hg19
49
GRCh38
Lab
50
AMP-T2D consortium
19
Xin Sun, UCSD
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
BIOSAMPLE
ASSAY
72 results
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Clear Filters
single cell RNA-seq
snATAC-seq
total RNA-seq
Hi-C
MPRA
primary cell
pancreatic acinar cell
6
1
pancreatic delta cell
7
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
+ See 5 more…
tissue
lung
9
10
islet of Langerhans
6
cell line
MIN6
1
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