Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
57
single cell RNA-seq
10
snATAC-seq
3
Hi-C
1
MPRA
Assay category
177
Transcription
10
DNA accessibility
3
3D chromatin structure
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
164
bam
164
bigWig
164
tsv
50
fastq
3
bedpe bed3+
3
cool
3
hic
1
txt
Organism
189
Homo sapiens
Biosample type
139
tissue
51
primary cell
1
cell line
Organ
160
pancreas
36
epithelium
19
lung
2
connective tissue
Project
169
AMP
19
LungMap
3
HPAP
Genome assembly (visualization)
167
hg19
164
GRCh38
Lab
169
AMP-T2D consortium
19
Xin Sun, UCSD
3
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
3
audit script error
BIOSAMPLE
ASSAY
191 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
snATAC-seq
Hi-C
MPRA
tissue
islet of Langerhans
120
lung
9
10
primary cell
pancreatic beta cell
9
1
pancreatic alpha cell
7
1
pancreatic acinar cell
5
1
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
cell line
MIN6
1
See all biosamples
Download