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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
single cell RNA-seq
75
ATAC-seq
51
total RNA-seq
6
snATAC-seq
2
Hi-C
1
RNA microarray
Assay category
160
Transcription
81
DNA accessibility
2
3D chromatin structure
Date released
229
August, 2021
106
August, 2017
101
February, 2021
95
February, 2023
82
October, 2019
47
September, 2023
46
May, 2022
29
March, 2020
29
October, 2018
25
February, 2020
25
November, 2017
23
May, 2020
22
May, 2019
21
November, 2019
19
April, 2020
15
April, 2019
15
May, 2023
14
July, 2019
12
December, 2017
9
October, 2017
8
January, 2021
6
September, 2017
5
March, 2019
4
December, 2018
4
July, 2018
4
November, 2020
3
December, 2019
3
November, 2018
2
May, 2021
1
August, 2022
1
January, 2019
Available data
99
tsv
64
bed narrowPeak
64
xls
57
txt
1
bedpe bed3+
1
hic
Organism
243
Homo sapiens
Biosample type
244
tissue
22
cell line
20
in vitro differentiated cells
1
primary cell
Organ
142
kidney
92
heart
6
blood vessel
6
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
pancreas
Project
244
AMP
Genome assembly (visualization)
76
GRCh38
2
hg19
Lab
142
Katalin Susztak, Upenn
100
AMP-T2D consortium
2
Bing Ren, UCSD
files.file_type!
bigWig
BIOSAMPLE
ASSAY
244 results
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Clear Filters
single cell RNA-seq
ATAC-seq
total RNA-seq
snATAC-seq
Hi-C
RNA microarray
tissue
kidney
11
75
49
6
1
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
aorta
4
aortic valve
4
pulmonary valve
4
tricuspid valve
4
mitral valve
3
cardiac atrium
2
cardiac ventricle
2
interventricular septum
2
islet of Langerhans
1
1
pulmonary artery
2
adipose tissue
1
subcutaneous adipose tissue
1
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