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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
84
ATAC-seq
69
total RNA-seq
6
snATAC-seq
3
Hi-C
1
RNA microarray
Assay category
175
Transcription
90
DNA accessibility
3
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
118
tsv
84
bed narrowPeak
64
xls
57
txt
39
bam
19
bigWig
2
bedpe bed3+
2
hic
Organism
268
Homo sapiens
Biosample type
269
tissue
60
cell line
47
in vitro differentiated cells
4
primary cell
Organ
128
kidney
92
heart
41
pancreas
6
blood vessel
6
vasculature
2
adipose tissue
2
artery
2
connective tissue
Project
269
AMP
Genome assembly (visualization)
103
GRCh38
41
hg19
Lab
139
AMP-T2D consortium
128
Katalin Susztak, Upenn
2
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
269 results
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Clear Filters
single cell RNA-seq
ATAC-seq
total RNA-seq
snATAC-seq
Hi-C
RNA microarray
tissue
kidney
8
64
49
6
1
islet of Langerhans
19
20
2
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
aorta
4
aortic valve
4
pulmonary valve
4
tricuspid valve
4
mitral valve
3
cardiac atrium
2
cardiac ventricle
2
interventricular septum
2
pulmonary artery
2
adipose tissue(adipose white tissue)
1
subcutaneous adipose tissue
1
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