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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
total RNA-seq
105
ATAC-seq
9
WGBS
6
RRBS
5
DNase-seq
1
FAIRE-seq
1
pCHi-C
Assay category
DNA binding
279
Transcription
111
DNA accessibility
15
DNA methylation
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
334
bam
334
bigWig
278
tsv
106
fastq
10
bed narrowPeak
10
bigBed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bed broadPeak
2
bigBed broadPeak
Organism
406
Homo sapiens
Biosample type
251
tissue
153
primary cell
1
cell line
1
in vitro differentiated cells
Organ
150
liver
94
pancreas
8
connective tissue
7
adipose tissue
4
musculature of body
3
epithelium
Project
361
AMP
45
T1D
Genome assembly (visualization)
336
hg19
286
GRCh38
Lab
361
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
406 results
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Clear Filters
total RNA-seq
ATAC-seq
WGBS
RRBS
DNase-seq
FAIRE-seq
pCHi-C
tissue
liver
143
3
1
islet of Langerhans
89
1
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
+ See 2 more…
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 28 more…
cell line
HepG2
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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