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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
108
ATAC-seq
5
DNase-seq
2
snATAC-seq
1
FAIRE-seq
Assay category
296
DNA binding
183
Transcription
116
DNA accessibility
15
DNA methylation
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
75
bed narrowPeak
13
bigWig
12
tsv
10
bam
10
bed bed3
10
bigBed narrowPeak
9
fastq
4
bed bed3+
3
bed bedgraph
3
txt
2
bed broadPeak
2
bigBed broadPeak
Organism
116
Homo sapiens
Biosample type
86
tissue
17
primary cell
13
in vitro differentiated cells
Organ
35
artery
35
blood vessel
35
heart
35
vasculature
27
eye
18
pancreas
15
epithelium
12
connective tissue
4
bone element
4
skeleton
2
adipose tissue
2
liver
1
brain
Project
103
AMP
13
T1D
Genome assembly (visualization)
55
hg19
42
GRCh38
Lab
100
AMP-T2D consortium
13
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
9
inconsistent ontology term
BIOSAMPLE
ASSAY
116 results
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Clear Filters
ATAC-seq
DNase-seq
snATAC-seq
FAIRE-seq
tissue
coronary artery
35
islet of Langerhans
11
1
2
1
retina
15
pigmented layer of retina
12
right lobe of liver
1
1
+ See 7 more…
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
skeletal muscle myoblast
2
+ See 3 more…
in vitro differentiated cells
chondrocyte
5
adipocyte
1
1
immature adipocyte
2
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
+ See 2 more…
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