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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ATAC-seq
3
DNase-seq
2
snATAC-seq
1
FAIRE-seq
Assay category
243
DNA binding
107
Transcription
99
DNA accessibility
14
DNA methylation
Date released
163
June, 2019
93
February, 2023
82
August, 2021
39
May, 2022
26
November, 2019
26
October, 2019
21
February, 2021
21
May, 2021
11
May, 2023
10
April, 2020
10
November, 2018
8
January, 2021
8
July, 2019
8
October, 2017
6
August, 2017
4
March, 2019
4
March, 2020
3
January, 2018
1
August, 2022
Available data
70
bed narrowPeak
10
bed bed3
8
bigWig
5
bam
5
bigBed narrowPeak
5
fastq
4
bed bed3+
3
bed bedgraph
3
txt
1
bed broadPeak
1
bigBed broadPeak
Organism
99
Homo sapiens
Biosample type
86
tissue
primary cell
13
in vitro differentiated cells
Organ
35
artery
35
blood vessel
35
heart
35
vasculature
27
eye
15
pancreas
12
connective tissue
12
epithelium
4
bone element
4
skeleton
2
adipose tissue
2
liver
1
brain
Project
86
AMP
13
T1D
Genome assembly (visualization)
50
hg19
39
GRCh38
Lab
83
AMP-T2D consortium
13
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
3
inconsistent ontology term
biosample_type!
primary cell
BIOSAMPLE
ASSAY
99 results
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ATAC-seq
DNase-seq
snATAC-seq
FAIRE-seq
tissue
coronary artery
35
islet of Langerhans
11
1
2
1
retina
15
pigmented layer of retina
12
right lobe of liver
1
1
+ See 7 more…
in vitro differentiated cells
chondrocyte
5
adipocyte
1
1
immature adipocyte
2
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
+ See 2 more…
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