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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
293
ChIP-seq
Assay category
293
DNA binding
89
Transcription
15
DNA methylation
11
DNA accessibility
Target of assay
196
histone modification
195
histone
107
broad histone mark
87
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
406
November, 2017
293
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
178
bam
178
fastq
168
bigWig
129
bed narrowPeak
83
tagAlign
37
bed broadPeak
33
bed bed3+
29
bigBed narrowPeak
12
bigBed broadPeak
Organism
287
Homo sapiens
Biosample type
175
tissue
67
in vitro differentiated cells
51
primary cell
Organ
117
connective tissue
93
pancreas
50
adipose tissue
48
liver
26
epithelium
22
musculature of body
Project
293
AMP
Genome assembly (visualization)
170
hg19
148
GRCh38
Lab
293
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
16
inconsistent control read length
inconsistent assembly
1
inconsistent control run_type
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
293 results
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Clear Filters
ChIP-seq
tissue
liver
48
islet of Langerhans
42
subcutaneous abdominal adipose tissue
36
skeletal muscle tissue
22
pancreas
13
+ See 2 more…
in vitro differentiated cells
adipocyte
67
primary cell
pancreatic alpha cell
13
pancreatic beta cell
13
skeletal muscle myoblast
13
pancreatic endocrine cell
12
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