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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
Assay category
91
DNA binding
15
Transcription
1
DNA accessibility
Target of assay
53
histone
53
histone modification
28
broad histone mark
24
narrow histone mark
22
transcription factor
16
control
4
RNA binding protein
2
chromatin remodeller
Date released
67
August, 2017
43
December, 2017
43
May, 2021
24
February, 2018
21
August, 2021
Available data
77
bam
77
fastq
63
bigWig
58
bed narrowPeak
14
tagAlign
7
bed bed3+
Organism
91
Homo sapiens
Biosample type
176
tissue
91
in vitro differentiated cells
53
primary cell
Organ
67
connective tissue
9
embryo
Project
91
AMP
Genome assembly (visualization)
64
GRCh38
64
hg19
Lab
91
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
8
inconsistent control read length
BIOSAMPLE
ASSAY
91 results
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ChIP-seq
in vitro differentiated cells
adipocyte
67
pancreatic endoderm
9
definitive endodermal cell
3
embryonic stem cell
3
endocrine cell
3
posterior foregut
3
primitive gut cell
3
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