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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
Assay category
53
DNA binding
5
DNA accessibility
1
DNA methylation
Target of assay
38
histone
38
histone modification
22
narrow histone mark
16
broad histone mark
13
control
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
121
May, 2021
53
August, 2017
32
September, 2018
31
June, 2019
24
October, 2019
9
November, 2017
5
May, 2019
4
August, 2021
Available data
53
bam
53
fastq
41
bigWig
28
bed narrowPeak
14
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
12
tagAlign
Organism
53
Homo sapiens
Biosample type
176
tissue
67
in vitro differentiated cells
53
primary cell
Organ
38
pancreas
26
epithelium
Project
53
AMP
Genome assembly (visualization)
41
hg19
39
GRCh38
Lab
53
AMP-T2D consortium
Audit category:
12
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
53 results
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ChIP-seq
primary cell
skeletal muscle myoblast
15
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
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