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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
179
ChIP-seq
Assay category
179
DNA binding
89
Transcription
9
DNA accessibility
9
DNA methylation
Target of assay
130
histone modification
129
histone
69
broad histone mark
60
narrow histone mark
36
control
13
transcription factor
4
RNA binding protein
1
chromatin remodeller
Date released
406
November, 2017
241
October, 2019
179
August, 2017
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
70
November, 2018
51
October, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
January, 2019
24
February, 2018
19
June, 2019
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
114
bam
114
fastq
110
bigWig
88
bed narrowPeak
63
tagAlign
38
bed broadPeak
31
bigBed narrowPeak
22
bed bed3+
13
bigBed broadPeak
Organism
172
Homo sapiens
Biosample type
126
tissue
53
primary cell
Organ
connective tissue
94
pancreas
50
adipose tissue
48
liver
26
epithelium
22
musculature of body
Project
179
AMP
Genome assembly (visualization)
111
hg19
90
GRCh38
Lab
179
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
10
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
month_released!
January, 2019
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
179 results
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Clear Filters
ChIP-seq
tissue
liver
48
islet of Langerhans
42
skeletal muscle tissue
22
pancreas
14
primary cell
skeletal muscle myoblast
15
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
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