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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
Assay category
60
DNA binding
9
Transcription
4
DNA accessibility
1
3D chromatin structure
1
DNA methylation
1
DNA sequencing
Target of assay
32
control
16
histone
16
histone modification
12
transcription factor
10
broad histone mark
6
narrow histone mark
2
RNA binding protein
Date released
101
November, 2017
75
May, 2021
33
August, 2017
27
August, 2021
18
October, 2019
8
February, 2018
8
June, 2019
5
December, 2017
4
November, 2018
3
February, 2021
3
January, 2019
2
November, 2019
1
May, 2019
Available data
27
bam
23
tagAlign
19
fastq
16
bigWig
15
bed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
60
Homo sapiens
Biosample type
tissue
27
in vitro differentiated cells
18
cell line
15
primary cell
Organ
19
connective tissue
19
liver
13
epithelium
12
pancreas
Project
60
AMP
Genome assembly (visualization)
118
hg19
GRCh38
Lab
42
AMP-T2D consortium
18
Bing Ren, UCSD
biosample_type!
tissue
assembly!
GRCh38
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
in vitro differentiated cells
adipocyte
19
neural progenitor cell
8
cell line
HepG2
18
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
2
hepatocyte
1
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