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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
6
DNA accessibility
1
DNA methylation
Target of assay
75
histone
histone modification
38
narrow histone mark
36
broad histone mark
24
transcription factor
21
control
6
RNA binding protein
3
chromatin remodeller
Date released
306
November, 2017
60
November, 2018
45
August, 2017
27
December, 2018
25
May, 2021
23
August, 2021
20
December, 2017
19
October, 2019
17
January, 2019
12
June, 2019
8
February, 2018
8
February, 2021
3
November, 2019
2
May, 2019
Available data
43
bam
43
fastq
25
bigWig
19
bed narrowPeak
7
bed bed3+
3
tagAlign
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
45
Homo sapiens
Biosample type
tissue
30
in vitro differentiated cells
15
primary cell
Organ
30
connective tissue
12
epithelium
12
pancreas
Project
45
AMP
Genome assembly (visualization)
26
hg19
24
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
target.investigated_as!
histone modification
biosample_type!
tissue
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
in vitro differentiated cells
adipocyte
30
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
3
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