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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
117
DNA binding
2
DNA accessibility
Target of assay
69
histone
69
histone modification
40
broad histone mark
34
transcription factor
28
narrow histone mark
14
control
4
RNA binding protein
2
chromatin remodeller
Date released
455
February, 2021
119
August, 2017
23
October, 2018
18
July, 2019
18
June, 2019
14
February, 2023
6
November, 2020
5
August, 2021
4
October, 2019
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
69
bam
69
fastq
63
bigWig
46
bed narrowPeak
22
tagAlign
11
bed bed3+
3
bigBed narrowPeak
2
bed broadPeak
1
bigBed broadPeak
Organism
119
Homo sapiens
Biosample type
68
in vitro differentiated cells
51
tissue
Organ
188
pancreas
119
connective tissue
51
adipose tissue
51
liver
29
epithelium
26
musculature of body
Project
119
AMP
Genome assembly (visualization)
64
hg19
63
GRCh38
Lab
119
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
assay_title!
WGBS
BIOSAMPLE
ASSAY
119 results
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ChIP-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
67
1
tissue
subcutaneous abdominal adipose tissue
36
white adipose tissue
12
adipose tissue
2
subcutaneous adipose tissue
1
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