Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
110
ChIP-seq
total RNA-seq
5
ATAC-seq
1
DNase-seq
Assay category
110
DNA binding
6
DNA accessibility
Target of assay
58
histone
58
histone modification
38
transcription factor
30
broad histone mark
27
narrow histone mark
14
control
9
RNA binding protein
2
chromatin remodeller
Date released
68
August, 2017
48
May, 2021
43
December, 2017
35
August, 2021
24
February, 2018
12
February, 2023
6
March, 2020
6
October, 2019
5
November, 2019
4
February, 2021
4
January, 2018
2
December, 2019
1
August, 2018
Available data
60
bam
58
bigWig
54
fastq
48
bed narrowPeak
20
tagAlign
7
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
116
Homo sapiens
Biosample type
210
primary cell
196
tissue
116
in vitro differentiated cells
17
cell line
Organ
68
connective tissue
3
epithelium
3
pancreas
Project
116
AMP
Genome assembly (visualization)
59
hg19
54
GRCh38
Lab
74
AMP-T2D consortium
42
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
116 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
67
1
embryonic stem cell
37
5
cardiomyocytes
3
pancreatic PP cell
3
Download