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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
288
ChIP-seq
89
total RNA-seq
9
WGBS
6
RRBS
5
ATAC-seq
5
DNase-seq
1
FAIRE-seq
Assay category
288
DNA binding
Target of assay
199
histone modification
198
histone
109
broad histone mark
88
narrow histone mark
50
control
47
transcription factor
RNA binding protein
3
chromatin remodeller
Date released
369
November, 2017
288
August, 2017
242
October, 2019
160
May, 2021
115
May, 2019
90
December, 2017
76
April, 2019
63
October, 2018
50
May, 2020
49
November, 2018
42
August, 2021
32
December, 2018
32
September, 2018
27
June, 2019
24
February, 2018
19
January, 2019
15
October, 2017
12
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
173
bam
173
fastq
163
bigWig
125
bed narrowPeak
85
tagAlign
37
bed broadPeak
31
bed bed3+
30
bigBed narrowPeak
11
bigBed broadPeak
Organism
281
Homo sapiens
Biosample type
174
tissue
63
in vitro differentiated cells
51
primary cell
Organ
113
connective tissue
92
pancreas
50
adipose tissue
48
liver
26
epithelium
22
musculature of body
Project
288
AMP
Genome assembly (visualization)
165
hg19
144
GRCh38
Lab
288
AMP-T2D consortium
Audit category:
38
missing controlled_by
Audit category:
16
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
288 results
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Clear Filters
ChIP-seq
tissue
liver
48
islet of Langerhans
40
subcutaneous abdominal adipose tissue
36
skeletal muscle tissue
22
pancreas
14
+ See 2 more…
in vitro differentiated cells
adipocyte
63
primary cell
pancreatic alpha cell
13
pancreatic beta cell
13
skeletal muscle myoblast
13
pancreatic endocrine cell
12
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