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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
145
ChIP-seq
7
WGBS
3
DNase-seq
2
RRBS
1
FAIRE-seq
Assay category
145
DNA binding
9
DNA methylation
4
DNA accessibility
Target of assay
96
histone
96
histone modification
60
broad histone mark
48
control
36
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
214
August, 2021
200
May, 2022
170
February, 2023
158
August, 2017
147
February, 2021
134
May, 2020
126
November, 2017
123
May, 2021
107
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
14
July, 2019
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
68
tagAlign
38
fastq
33
bam
25
bigWig
24
bed narrowPeak
22
bed broadPeak
4
bed bedMethyl
bigBed bedMethyl
4
bigBed narrowPeak
2
bigBed broadPeak
Organism
157
Homo sapiens
Biosample type
123
tissue
19
in vitro differentiated cells
16
primary cell
Organ
60
connective tissue
41
adipose tissue
36
pancreas
34
liver
24
musculature of body
12
epithelium
Project
158
AMP
Genome assembly (visualization)
272
hg19
GRCh38
Lab
158
AMP-T2D consortium
assembly!
GRCh38
files.file_type!
bigBed bedMethyl
BIOSAMPLE
ASSAY
158 results
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Clear Filters
ChIP-seq
WGBS
DNase-seq
RRBS
FAIRE-seq
tissue
subcutaneous abdominal adipose tissue
36
3
liver
30
3
skeletal muscle tissue
22
2
islet of Langerhans
21
1
adipose tissue
1
1
+ See 2 more…
in vitro differentiated cells
adipocyte
19
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
2
2
See all biosamples
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