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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
ChIP-seq
Assay category
103
DNA binding
Target of assay
103
histone modification
102
histone
52
narrow histone mark
49
broad histone mark
46
transcription factor
7
RNA binding protein
3
chromatin remodeller
2
control
Date released
169
October, 2019
103
August, 2017
91
May, 2019
86
May, 2021
73
November, 2017
59
April, 2019
32
September, 2018
30
December, 2017
30
October, 2018
19
June, 2019
19
May, 2020
16
August, 2021
16
February, 2018
10
November, 2019
7
January, 2019
6
October, 2017
3
March, 2020
Available data
103
bam
103
bigWig
103
fastq
88
bed narrowPeak
30
bigBed narrowPeak
17
bed broadPeak
17
tagAlign
12
bed bed3+
11
bigBed broadPeak
Organism
97
Homo sapiens
Biosample type
40
tissue
38
primary cell
25
in vitro differentiated cells
Organ
52
pancreas
26
connective tissue
14
epithelium
13
liver
1
adipose tissue
Project
103
AMP
Genome assembly (visualization)
123
hg19
103
GRCh38
Lab
103
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
10
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
103 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
14
liver
13
pancreas
12
adipose tissue
1
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
12
pancreatic alpha cell
7
pancreatic beta cell
7
in vitro differentiated cells
adipocyte
25
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