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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
ChIP-seq
Assay category
52
DNA binding
Target of assay
103
histone modification
102
histone
52
narrow histone mark
49
broad histone mark
46
transcription factor
7
RNA binding protein
3
chromatin remodeller
2
control
Date released
119
October, 2019
52
August, 2017
42
May, 2021
33
May, 2019
28
November, 2017
22
April, 2019
19
May, 2020
15
December, 2017
15
September, 2018
11
June, 2019
11
October, 2018
9
August, 2021
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
1
October, 2017
Available data
52
bam
52
bigWig
52
fastq
42
bed narrowPeak
12
bigBed narrowPeak
7
bed broadPeak
7
tagAlign
6
bed bed3+
5
bigBed broadPeak
Organism
50
Homo sapiens
Biosample type
22
primary cell
18
tissue
12
in vitro differentiated cells
Organ
28
pancreas
13
connective tissue
8
epithelium
5
liver
1
adipose tissue
Project
52
AMP
Genome assembly (visualization)
60
hg19
52
GRCh38
Lab
52
AMP-T2D consortium
Audit category:
11
missing controlled_by
Audit category:
7
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
52 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
8
skeletal muscle myoblast
6
pancreatic alpha cell
4
pancreatic beta cell
4
tissue
islet of Langerhans
8
liver
5
pancreas
4
adipose tissue
1
in vitro differentiated cells
adipocyte
12
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