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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
119
ChIP-seq
3
ATAC-seq
3
DNase-seq
1
RRBS
Assay category
119
DNA binding
6
DNA accessibility
1
DNA methylation
Target of assay
74
histone
74
histone modification
37
narrow histone mark
36
broad histone mark
24
transcription factor
21
control
6
RNA binding protein
3
chromatin remodeller
Date released
359
May, 2021
320
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
126
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
59
September, 2020
58
November, 2018
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
111
bam
111
fastq
93
bigWig
75
bed narrowPeak
26
tagAlign
19
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
7
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
126
Homo sapiens
Biosample type
tissue
68
in vitro differentiated cells
58
primary cell
Organ
68
connective tissue
41
pancreas
29
epithelium
Project
126
AMP
Genome assembly (visualization)
95
hg19
90
GRCh38
Lab
126
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent assembly
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
biosample_type!
tissue
BIOSAMPLE
ASSAY
126 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
RRBS
in vitro differentiated cells
adipocyte
67
1
primary cell
skeletal muscle myoblast
14
2
1
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
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