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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
3
ATAC-seq
1
DNase-seq
Assay category
85
DNA binding
4
DNA accessibility
Target of assay
61
histone
61
histone modification
33
narrow histone mark
27
broad histone mark
23
transcription factor
5
RNA binding protein
3
chromatin remodeller
1
control
Date released
238
May, 2021
223
November, 2017
116
February, 2021
89
August, 2017
72
September, 2018
57
November, 2018
48
July, 2018
47
June, 2019
45
May, 2020
45
October, 2019
43
April, 2018
41
August, 2021
41
December, 2017
31
February, 2018
27
December, 2018
20
January, 2019
18
July, 2019
18
November, 2019
7
August, 2020
7
March, 2020
6
November, 2020
5
December, 2019
5
September, 2017
4
May, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
October, 2018
1
March, 2023
Available data
89
bam
89
fastq
88
bigWig
71
bed narrowPeak
15
bigBed narrowPeak
12
bed broadPeak
12
bigBed broadPeak
10
tagAlign
7
bed bed3+
Organism
89
Homo sapiens
Biosample type
tissue
49
in vitro differentiated cells
40
primary cell
Organ
49
connective tissue
29
pancreas
17
epithelium
Project
89
AMP
Genome assembly (visualization)
94
hg19
89
GRCh38
Lab
89
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
11
inconsistent control read length
inconsistent assembly
1
inconsistent control run_type
biosample_type!
tissue
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
48
1
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
11
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
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