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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
2
DNase-seq
Assay category
13
DNA binding
2
DNA accessibility
Target of assay
11
histone
11
histone modification
6
broad histone mark
5
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
64
November, 2017
24
June, 2019
15
August, 2017
5
October, 2019
November, 2020
Available data
112
bam
112
fastq
94
bigWig
76
bed narrowPeak
26
tagAlign
20
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
7
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
15
Homo sapiens
Biosample type
tissue
14
primary cell
1
in vitro differentiated cells
Organ
1
connective tissue
Project
15
AMP
Genome assembly (visualization)
15
hg19
13
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
1
inconsistent assembly
biosample_type!
tissue
month_released!
November, 2020
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
DNase-seq
primary cell
skeletal muscle myoblast
13
1
in vitro differentiated cells
adipocyte
1
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