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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ChIP-seq
3
ATAC-seq
3
DNase-seq
1
RRBS
Assay category
99
DNA binding
6
DNA accessibility
1
DNA methylation
Target of assay
75
histone
75
histone modification
38
narrow histone mark
36
broad histone mark
24
transcription factor
control
6
RNA binding protein
3
chromatin remodeller
Date released
350
May, 2021
265
November, 2017
167
February, 2021
148
May, 2020
134
May, 2022
110
February, 2023
106
August, 2017
78
August, 2021
73
September, 2018
60
October, 2019
59
November, 2018
59
September, 2020
48
July, 2018
47
June, 2019
43
April, 2018
37
December, 2017
31
February, 2018
28
December, 2018
28
July, 2019
24
March, 2020
20
January, 2019
19
November, 2019
9
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
September, 2017
4
August, 2018
4
May, 2019
4
October, 2022
3
June, 2018
2
October, 2018
Available data
93
bam
93
bigWig
93
fastq
76
bed narrowPeak
23
tagAlign
20
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
6
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
106
Homo sapiens
Biosample type
tissue
60
in vitro differentiated cells
46
primary cell
Organ
60
connective tissue
29
pancreas
17
epithelium
Project
106
AMP
Genome assembly (visualization)
94
hg19
90
GRCh38
Lab
106
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
biosample_type!
tissue
target.investigated_as!
control
BIOSAMPLE
ASSAY
106 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
RRBS
in vitro differentiated cells
adipocyte
59
1
primary cell
skeletal muscle myoblast
14
2
1
pancreatic endocrine cell
12
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
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