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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
3
ATAC-seq
3
DNase-seq
1
RRBS
Assay category
114
DNA binding
6
DNA accessibility
1
DNA methylation
Target of assay
75
histone
75
histone modification
38
narrow histone mark
36
broad histone mark
24
transcription factor
21
control
RNA binding protein
3
chromatin remodeller
Date released
354
May, 2021
287
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
121
August, 2017
110
February, 2023
89
August, 2021
73
September, 2018
72
October, 2019
59
September, 2020
51
June, 2019
48
July, 2018
44
December, 2017
43
April, 2018
41
November, 2018
39
February, 2018
31
July, 2019
26
December, 2018
24
March, 2020
20
November, 2019
January, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
September, 2017
4
August, 2018
4
May, 2019
4
October, 2022
3
June, 2018
2
October, 2018
Available data
106
bam
106
fastq
88
bigWig
70
bed narrowPeak
26
tagAlign
18
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
7
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
121
Homo sapiens
Biosample type
tissue
64
in vitro differentiated cells
57
primary cell
Organ
64
connective tissue
41
pancreas
29
epithelium
Project
121
AMP
Genome assembly (visualization)
90
hg19
86
GRCh38
Lab
121
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
biosample_type!
tissue
target.investigated_as!
RNA binding protein
month_released!
January, 2019
BIOSAMPLE
ASSAY
121 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
RRBS
in vitro differentiated cells
adipocyte
63
1
primary cell
skeletal muscle myoblast
13
2
1
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
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