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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
Assay category
73
DNA binding
Target of assay
162
histone modification
161
histone
87
broad histone mark
73
narrow histone mark
50
control
45
transcription factor
6
RNA binding protein
2
chromatin remodeller
Date released
141
October, 2019
73
August, 2017
64
May, 2021
34
May, 2019
27
May, 2020
25
November, 2017
23
April, 2019
16
December, 2017
15
May, 2024
15
September, 2018
11
August, 2021
11
June, 2019
11
October, 2018
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
1
October, 2017
0
May, 2022
Available data
60
bigWig
52
bam
52
fastq
50
bed narrowPeak
29
tagAlign
bed broadPeak
12
bigBed narrowPeak
6
bed bed3+
5
bigBed broadPeak
Organism
73
Homo sapiens
Biosample type
40
tissue
17
primary cell
16
in vitro differentiated cells
Organ
30
pancreas
27
connective tissue
13
liver
11
adipose tissue
8
epithelium
2
musculature of body
Project
73
AMP
Genome assembly (visualization)
45
GRCh38
45
hg19
Lab
73
AMP-T2D consortium
Audit category:
11
missing controlled_by
Audit category:
7
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
73 results
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Clear Filters
ChIP-seq
tissue
liver
13
islet of Langerhans
12
subcutaneous abdominal adipose tissue
10
pancreas
2
skeletal muscle tissue
2
+ See 1 more…
primary cell
pancreatic endocrine cell
8
pancreatic alpha cell
4
pancreatic beta cell
4
skeletal muscle myoblast
1
in vitro differentiated cells
adipocyte
16
See all biosamples
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