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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
283
ChIP-seq
Assay category
283
DNA binding
89
Transcription
15
DNA methylation
9
DNA accessibility
Target of assay
188
histone modification
187
histone
103
broad histone mark
83
narrow histone mark
50
control
45
transcription factor
6
RNA binding protein
2
chromatin remodeller
Date released
342
November, 2017
283
August, 2017
240
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
181
bam
181
fastq
171
bigWig
132
bed narrowPeak
85
tagAlign
39
bed broadPeak
33
bed bed3+
32
bigBed narrowPeak
bigBed broadPeak
Organism
276
Homo sapiens
Biosample type
176
tissue
67
in vitro differentiated cells
40
primary cell
Organ
117
connective tissue
94
pancreas
50
adipose tissue
48
liver
26
epithelium
22
musculature of body
Project
283
AMP
Genome assembly (visualization)
160
hg19
139
GRCh38
Lab
283
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
16
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
283 results
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Clear Filters
ChIP-seq
tissue
liver
48
islet of Langerhans
42
subcutaneous abdominal adipose tissue
36
skeletal muscle tissue
22
pancreas
14
+ See 2 more…
in vitro differentiated cells
adipocyte
67
primary cell
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
skeletal muscle myoblast
2
See all biosamples
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