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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
107
ChIP-seq
Assay category
107
DNA binding
4
DNA accessibility
1
DNA methylation
Target of assay
64
histone
64
histone modification
33
narrow histone mark
30
broad histone mark
22
transcription factor
21
control
4
RNA binding protein
2
chromatin remodeller
Date released
260
November, 2017
165
May, 2021
107
August, 2017
60
November, 2018
46
December, 2017
45
October, 2019
43
August, 2021
32
September, 2018
31
June, 2019
27
December, 2018
24
February, 2018
18
January, 2019
13
November, 2019
8
February, 2021
5
May, 2019
1
March, 2020
Available data
106
bam
106
fastq
88
bigWig
70
bed narrowPeak
26
tagAlign
14
bigBed narrowPeak
13
bed broadPeak
bigBed broadPeak
7
bed bed3+
Organism
107
Homo sapiens
Biosample type
tissue
67
in vitro differentiated cells
40
primary cell
Organ
67
connective tissue
38
pancreas
26
epithelium
Project
107
AMP
Genome assembly (visualization)
76
hg19
75
GRCh38
Lab
107
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
11
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
files.file_type!
bigBed broadPeak
biosample_type!
tissue
BIOSAMPLE
ASSAY
107 results
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ChIP-seq
in vitro differentiated cells
adipocyte
67
primary cell
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
skeletal muscle myoblast
2
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