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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
119
ChIP-seq
5
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
119
DNA binding
8
DNA accessibility
Target of assay
97
histone modification
96
histone
50
broad histone mark
45
narrow histone mark
22
transcription factor
5
RNA binding protein
2
chromatin remodeller
Date released
255
November, 2017
182
October, 2019
133
May, 2021
127
August, 2017
106
August, 2021
97
May, 2019
72
December, 2017
65
April, 2019
65
February, 2023
64
November, 2018
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
23
June, 2019
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
1
November, 2020
Available data
198
fastq
193
bam
183
bigWig
142
bed narrowPeak
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
33
bed bed3+
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
121
Homo sapiens
Biosample type
66
tissue
42
in vitro differentiated cells
19
primary cell
Organ
49
pancreas
45
connective tissue
18
liver
17
epithelium
13
musculature of body
3
adipose tissue
Project
127
AMP
Genome assembly (visualization)
127
hg19
105
GRCh38
Lab
127
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
16
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
files.file_type!
bigBed broadPeak
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
127 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
18
1
1
liver
17
skeletal muscle tissue
13
pancreas
12
adipose tissue
1
+ See 3 more…
in vitro differentiated cells
adipocyte
42
primary cell
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
skeletal muscle myoblast
1
1
pancreatic acinar cell
1
See all biosamples
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