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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
264
ChIP-seq
89
total RNA-seq
9
WGBS
6
RRBS
1
DNase-seq
Assay category
264
DNA binding
Target of assay
169
histone modification
168
histone
91
broad histone mark
76
narrow histone mark
50
control
45
transcription factor
6
RNA binding protein
2
chromatin remodeller
Date released
264
August, 2017
184
October, 2019
165
May, 2021
94
November, 2017
50
May, 2020
44
December, 2017
43
August, 2021
32
September, 2018
29
October, 2018
24
February, 2018
23
May, 2019
16
April, 2019
13
November, 2019
9
October, 2017
8
February, 2021
8
June, 2019
7
November, 2018
6
September, 2017
4
December, 2018
4
January, 2019
3
March, 2020
Available data
181
bam
181
fastq
171
bigWig
132
bed narrowPeak
85
tagAlign
39
bed broadPeak
33
bed bed3+
bigBed narrowPeak
13
bigBed broadPeak
Organism
263
Homo sapiens
Biosample type
158
tissue
67
in vitro differentiated cells
39
primary cell
Organ
116
connective tissue
82
pancreas
49
adipose tissue
43
liver
26
epithelium
22
musculature of body
Project
264
AMP
Genome assembly (visualization)
141
hg19
120
GRCh38
Lab
264
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
10
inconsistent control read length
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
264 results
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Clear Filters
ChIP-seq
tissue
liver
43
islet of Langerhans
42
subcutaneous abdominal adipose tissue
36
skeletal muscle tissue
22
white adipose tissue
12
+ See 2 more…
in vitro differentiated cells
adipocyte
67
primary cell
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
skeletal muscle myoblast
1
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