Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
ChIP-seq
9
WGBS
6
RRBS
5
ATAC-seq
5
DNase-seq
1
FAIRE-seq
Assay category
97
DNA binding
15
DNA methylation
11
DNA accessibility
Target of assay
histone modification
198
histone
109
broad histone mark
88
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
318
November, 2017
200
May, 2022
199
June, 2019
189
February, 2023
176
August, 2021
156
February, 2021
125
May, 2020
123
August, 2017
102
October, 2019
88
November, 2018
86
May, 2021
63
December, 2017
59
September, 2020
47
September, 2023
44
October, 2018
43
July, 2019
35
December, 2018
31
November, 2019
28
May, 2019
20
April, 2019
19
April, 2020
18
January, 2019
16
January, 2021
16
March, 2020
15
May, 2023
15
September, 2018
12
November, 2020
11
October, 2017
11
September, 2017
8
February, 2018
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
184
fastq
179
bam
149
bigWig
tsv
34
bed narrowPeak
21
bed bed3+
12
bigBed narrowPeak
11
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
4
bed broadPeak
4
bigBed broadPeak
Organism
122
Homo sapiens
Biosample type
71
tissue
31
in vitro differentiated cells
21
primary cell
Organ
56
connective tissue
33
pancreas
25
adipose tissue
21
liver
15
epithelium
7
musculature of body
Project
123
AMP
Genome assembly (visualization)
64
hg19
57
GRCh38
Lab
123
AMP-T2D consortium
Audit category:
23
missing controlled_by
Audit category:
6
inconsistent control read length
files.file_type!
tsv
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
123 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
liver
15
3
1
islet of Langerhans
14
1
1
white adipose tissue
12
subcutaneous abdominal adipose tissue
5
3
skeletal muscle tissue
3
4
+ See 4 more…
in vitro differentiated cells
adipocyte
30
1
primary cell
pancreatic alpha cell
6
1
pancreatic beta cell
6
1
skeletal muscle myoblast
3
1
2
pancreatic acinar cell
1
See all biosamples
Download