Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
5
ATAC-seq
4
DNase-seq
1
FAIRE-seq
Assay category
114
DNA binding
10
DNA accessibility
Target of assay
99
histone modification
98
histone
51
broad histone mark
46
narrow histone mark
15
transcription factor
6
RNA binding protein
3
chromatin remodeller
Date released
313
November, 2017
182
October, 2019
133
May, 2021
124
August, 2017
103
August, 2021
97
May, 2019
65
April, 2019
65
February, 2023
64
November, 2018
62
December, 2017
46
September, 2018
45
October, 2018
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
23
June, 2019
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
1
November, 2020
Available data
287
fastq
282
bam
272
bigWig
142
bed narrowPeak
89
tsv
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
118
Homo sapiens
Biosample type
54
tissue
37
in vitro differentiated cells
33
primary cell
Organ
40
connective tissue
39
pancreas
17
epithelium
16
liver
13
musculature of body
3
adipose tissue
Project
124
AMP
Genome assembly (visualization)
124
hg19
100
GRCh38
Lab
124
AMP-T2D consortium
Audit category:
12
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
124 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
liver
15
skeletal muscle tissue
13
pancreas
12
islet of Langerhans
8
1
1
adipose tissue
1
+ See 3 more…
in vitro differentiated cells
adipocyte
36
1
primary cell
skeletal muscle myoblast
14
2
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
See all biosamples
Download