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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
65
ChIP-seq
3
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Assay category
89
Transcription
65
DNA binding
5
DNA accessibility
Target of assay
58
histone
58
histone modification
30
narrow histone mark
28
broad histone mark
7
transcription factor
2
RNA binding protein
Date released
159
August, 2017
153
July, 2018
72
September, 2018
43
May, 2021
42
October, 2018
39
April, 2018
31
November, 2019
26
February, 2021
10
March, 2020
8
October, 2019
7
August, 2020
7
November, 2018
5
October, 2017
5
September, 2017
4
July, 2019
4
June, 2019
3
August, 2018
3
September, 2020
1
June, 2018
1
May, 2019
Available data
168
bam
168
fastq
159
bigWig
89
tsv
49
bed narrowPeak
19
bed bed3+
17
bigBed narrowPeak
16
tagAlign
12
bed broadPeak
Organism
153
Homo sapiens
Biosample type
130
tissue
29
primary cell
Organ
159
pancreas
65
connective tissue
18
liver
17
adipose tissue
17
epithelium
13
musculature of body
Project
159
AMP
Genome assembly (visualization)
159
hg19
152
GRCh38
Lab
159
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
8
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
159 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
27
1
1
pancreas
12
primary cell
pancreatic endocrine cell
12
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
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