Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
6
WGBS
2
DNase-seq
1
ATAC-seq
Assay category
117
DNA binding
6
DNA methylation
3
DNA accessibility
Target of assay
69
histone
69
histone modification
40
broad histone mark
34
transcription factor
28
narrow histone mark
14
control
4
RNA binding protein
2
chromatin remodeller
Date released
455
February, 2021
125
August, 2017
23
October, 2018
18
July, 2019
18
June, 2019
14
February, 2023
6
November, 2020
5
August, 2021
4
October, 2019
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
73
fastq
72
bam
66
bigWig
47
bed narrowPeak
22
tagAlign
12
bed bed3+
4
bigBed narrowPeak
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
Organism
126
Homo sapiens
Biosample type
68
in vitro differentiated cells
58
tissue
Organ
195
pancreas
126
connective tissue
107
liver
58
adipose tissue
29
epithelium
26
musculature of body
15
blood
15
bodily fluid
9
spleen
2
brain
Project
126
AMP
Genome assembly (visualization)
66
GRCh38
65
hg19
Lab
126
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
month_released!
January, 2018
BIOSAMPLE
ASSAY
126 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
DNase-seq
ATAC-seq
in vitro differentiated cells
adipocyte
67
1
tissue
subcutaneous abdominal adipose tissue
36
3
white adipose tissue
12
adipose tissue
2
3
omental fat pad
1
subcutaneous adipose tissue
1
Download