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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
Assay category
51
DNA binding
Target of assay
218
histone modification
217
histone
117
broad histone mark
99
narrow histone mark
58
control
51
transcription factor
12
RNA binding protein
3
chromatin remodeller
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
5
May, 2024
4
June, 2019
1
November, 2019
Available data
51
bam
51
bigWig
47
fastq
28
bed narrowPeak
19
bed bed3+
6
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
Organism
51
Homo sapiens
Biosample type
23
tissue
22
in vitro differentiated cells
6
primary cell
Organ
35
connective tissue
12
adipose tissue
7
pancreas
4
liver
2
epithelium
1
eye
1
heart
1
kidney
Project
51
AMP
Genome assembly (visualization)
51
hg19
50
GRCh38
Lab
51
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
23
missing controlled_by
Audit category:
6
inconsistent control read length
month_released!
March, 2020
BIOSAMPLE
ASSAY
51 results
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Clear Filters
ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
7
liver
4
in vitro differentiated cells
adipocyte
22
primary cell
skeletal muscle myoblast
2
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
retinal pigment epithelial cell
1
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