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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
158
ChIP-seq
89
total RNA-seq
9
WGBS
5
RRBS
1
DNase-seq
Assay category
158
DNA binding
89
Transcription
14
DNA methylation
1
DNA accessibility
Target of assay
106
histone modification
105
histone
61
broad histone mark
44
narrow histone mark
29
control
23
transcription factor
2
RNA binding protein
Date released
545
February, 2021
262
August, 2017
229
August, 2021
195
October, 2019
May, 2020
120
July, 2018
95
February, 2023
75
July, 2019
66
May, 2022
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
29
October, 2018
25
February, 2020
25
November, 2017
22
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
15
May, 2023
12
December, 2017
9
November, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
March, 2019
4
December, 2018
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
1
January, 2019
Available data
178
bigWig
175
fastq
170
bam
89
tsv
66
bed narrowPeak
59
tagAlign
26
bed bed3+
26
bed broadPeak
bigBed narrowPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
261
Homo sapiens
Biosample type
262
tissue
67
in vitro differentiated cells
40
primary cell
Organ
133
pancreas
55
adipose tissue
55
connective tissue
48
liver
26
musculature of body
Project
262
AMP
Genome assembly (visualization)
158
hg19
137
GRCh38
Lab
262
AMP-T2D consortium
Audit category:
22
missing controlled_by
month_released!
May, 2020
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
262 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
DNase-seq
tissue
islet of Langerhans
42
89
liver
43
3
1
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
white adipose tissue
12
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