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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
3
ATAC-seq
1
DNase-seq
Assay category
47
DNA binding
4
DNA accessibility
Target of assay
25
histone
25
histone modification
22
transcription factor
12
broad histone mark
12
narrow histone mark
4
RNA binding protein
2
chromatin remodeller
Date released
89
May, 2021
48
August, 2017
34
December, 2017
31
February, 2018
22
August, 2021
22
February, 2021
4
January, 2018
4
October, 2019
3
February, 2023
2
March, 2020
Available data
54
bam
54
fastq
51
bigWig
45
bed narrowPeak
14
tagAlign
11
bed bed3+
5
bed bed3
3
bed bedgraph
3
txt
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
51
Homo sapiens
Biosample type
178
tissue
51
in vitro differentiated cells
46
primary cell
Organ
48
connective tissue
Project
51
AMP
Genome assembly (visualization)
51
hg19
48
GRCh38
Lab
48
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
47
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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