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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
132
ChIP-seq
7
WGBS
6
RRBS
1
DNase-seq
1
single cell RNA-seq
Assay category
132
DNA binding
13
DNA methylation
1
DNA accessibility
1
Transcription
Target of assay
76
histone
76
histone modification
55
control
48
broad histone mark
28
narrow histone mark
1
recombinant protein
1
transcription factor
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
375
fastq
369
bam
bigWig
215
bed narrowPeak
115
bigBed narrowPeak
89
tsv
85
tagAlign
50
bed broadPeak
42
bed bed3+
24
bigBed broadPeak
13
bed bedMethyl
13
bigBed bedMethyl
1
csv
Organism
146
Homo sapiens
Biosample type
109
tissue
20
in vitro differentiated cells
14
primary cell
4
cell line
Organ
60
connective tissue
40
adipose tissue
37
liver
29
pancreas
13
musculature of body
12
epithelium
3
blood
3
bodily fluid
3
spleen
Project
147
AMP
Genome assembly (visualization)
6
hg19
2
GRCh38
Lab
147
AMP-T2D consortium
Audit category:
1
missing controlled_by
files.file_type!
bigWig
BIOSAMPLE
ASSAY
147 results
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Clear Filters
ChIP-seq
WGBS
RRBS
DNase-seq
single cell RNA-seq
tissue
subcutaneous abdominal adipose tissue
35
3
liver
31
3
1
islet of Langerhans
15
skeletal muscle tissue
9
4
spleen
3
+ See 3 more…
in vitro differentiated cells
adipocyte
20
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic cell
1
skeletal muscle myoblast
1
cell line
GM12878
3
HepG2
1
See all biosamples
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